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geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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Difference between 'GO:0030968 endoplasmic reticulum unfolded protein response' and 'GO:0006984 ER-nucleus signaling pathway' ? #28057

Open pgaudet opened 3 months ago

pgaudet commented 3 months ago

Hi @ValWood @sylvainpoux @vanaukenk

Do you know what is the difference between 'GO:0030968 endoplasmic reticulum unfolded protein response' and 'GO:0006984 ER-nucleus signaling pathway'? They have very overlapping children:

image

Do we need both?

Note that @hattrill and I have moved these terms under intracellular signal transduction. Please let us know if this is incorrect.

Thanks, Pascale

ValWood commented 3 months ago

See https://github.com/geneontology/go-ontology/issues/20914 and https://github.com/geneontology/go-ontology/issues/14380

There are a bunch of terms, some seem to mean the same thing, but the RIDD branch of the pathway is not signalling. multiple issues as usual!