Closed balhoff closed 2 weeks ago
Here's a diff of how these changes impact the classified ontology:
http://purl.obolibrary.org/obo/go.owl
http://purl.obolibrary.org/obo/go/releases/2024-11-06/go.owl
file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl
http://purl.obolibrary.org/obo/go.owl
http://purl.obolibrary.org/obo/go/releases/2024-11-06/go.owl
file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl
http://purl.obolibrary.org/obo/GO_0106359
http://purl.obolibrary.org/obo/GO_0070330
aromatase activity database_cross_reference "UM-BBD_reactionID:r1137"
aromatase activity database_cross_reference "UM-BBD_reactionID:r1132"
http://purl.obolibrary.org/obo/GO_0034830
http://purl.obolibrary.org/obo/GO_0018699
http://purl.obolibrary.org/obo/GO_0018829
http://purl.obolibrary.org/obo/GO_0018702
http://purl.obolibrary.org/obo/GO_0018559
http://purl.obolibrary.org/obo/GO_0034949
http://purl.obolibrary.org/obo/GO_0034827
http://purl.obolibrary.org/obo/GO_0018557
http://purl.obolibrary.org/obo/GO_0018566
http://purl.obolibrary.org/obo/GO_0018902
http://purl.obolibrary.org/obo/GO_0018512
http://purl.obolibrary.org/obo/GO_0018827
http://purl.obolibrary.org/obo/GO_0018646
http://purl.obolibrary.org/obo/GO_0018608
http://purl.obolibrary.org/obo/GO_0018607
http://purl.obolibrary.org/obo/GO_0034534
http://purl.obolibrary.org/obo/GO_0034521
http://purl.obolibrary.org/obo/GO_0034565
http://purl.obolibrary.org/obo/GO_0018561
http://purl.obolibrary.org/obo/GO_0018556
http://purl.obolibrary.org/obo/GO_0018542
http://purl.obolibrary.org/obo/GO_0018563
http://purl.obolibrary.org/obo/GO_0034955
http://purl.obolibrary.org/obo/GO_0018584
http://purl.obolibrary.org/obo/GO_0034546
http://purl.obolibrary.org/obo/GO_0102477
http://purl.obolibrary.org/obo/GO_0018701
http://purl.obolibrary.org/obo/GO_0018574
http://purl.obolibrary.org/obo/GO_0034948
http://purl.obolibrary.org/obo/GO_0034945
http://purl.obolibrary.org/obo/GO_0018573
http://purl.obolibrary.org/obo/GO_0034528
http://purl.obolibrary.org/obo/GO_0034908
http://purl.obolibrary.org/obo/GO_0018700
http://purl.obolibrary.org/obo/GO_0034532
http://purl.obolibrary.org/obo/GO_0034536
http://purl.obolibrary.org/obo/GO_0018654
http://purl.obolibrary.org/obo/GO_0018844
http://purl.obolibrary.org/obo/GO_0018615
http://purl.obolibrary.org/obo/GO_0034860
http://purl.obolibrary.org/obo/GO_0034834
http://purl.obolibrary.org/obo/GO_0034835
http://purl.obolibrary.org/obo/GO_0034915
http://purl.obolibrary.org/obo/GO_0034916
http://purl.obolibrary.org/obo/GO_0034526
http://purl.obolibrary.org/obo/GO_0034520
http://purl.obolibrary.org/obo/GO_0018655
http://purl.obolibrary.org/obo/GO_0102868
http://purl.obolibrary.org/obo/GO_0034539
http://purl.obolibrary.org/obo/GO_0034554
http://purl.obolibrary.org/obo/GO_0034555
http://purl.obolibrary.org/obo/GO_0018562
http://purl.obolibrary.org/obo/GO_0018568
http://purl.obolibrary.org/obo/GO_0018572
http://purl.obolibrary.org/obo/GO_0018630
http://purl.obolibrary.org/obo/GO_0034900
http://purl.obolibrary.org/obo/GO_0034819
http://purl.obolibrary.org/obo/GO_0034896
http://purl.obolibrary.org/obo/GO_0034803
http://purl.obolibrary.org/obo/GO_0018653
http://purl.obolibrary.org/obo/GO_0034540
http://purl.obolibrary.org/obo/GO_0010435
http://purl.obolibrary.org/obo/GO_0102575
http://purl.obolibrary.org/obo/GO_0102574
http://purl.obolibrary.org/obo/GO_0102150
http://purl.obolibrary.org/obo/GO_0102576
http://purl.obolibrary.org/obo/GO_0102327
http://purl.obolibrary.org/obo/GO_0034810
http://purl.obolibrary.org/obo/GO_0034922
http://purl.obolibrary.org/obo/GO_0034936
http://purl.obolibrary.org/obo/GO_0034855
http://purl.obolibrary.org/obo/GO_0018543
http://purl.obolibrary.org/obo/GO_0018617
http://purl.obolibrary.org/obo/GO_0018604
http://purl.obolibrary.org/obo/GO_0018544
http://purl.obolibrary.org/obo/GO_0018471
http://purl.obolibrary.org/obo/GO_0034530
http://purl.obolibrary.org/obo/GO_0018660
http://purl.obolibrary.org/obo/GO_0034894
http://purl.obolibrary.org/obo/GO_0034575
http://purl.obolibrary.org/obo/GO_0034580
http://purl.obolibrary.org/obo/GO_0102189
http://purl.obolibrary.org/obo/GO_0018532
http://purl.obolibrary.org/obo/GO_0018558
http://purl.obolibrary.org/obo/GO_0034543
http://purl.obolibrary.org/obo/GO_0018831
http://purl.obolibrary.org/obo/GO_0034905
http://purl.obolibrary.org/obo/GO_0034836
http://purl.obolibrary.org/obo/GO_0102222
http://purl.obolibrary.org/obo/GO_0034814
http://purl.obolibrary.org/obo/GO_0052607
obsolete 7-hydroxy-chlorophyllide a oxygenase activity database_cross_reference "MetaCyc:RXN-7677"
obsolete 7-hydroxy-chlorophyllide a oxygenase activity database_cross_reference "KEGG_REACTION:R08204"
http://purl.obolibrary.org/obo/GO_0034812
http://purl.obolibrary.org/obo/GO_0018613
http://purl.obolibrary.org/obo/GO_0034818
http://purl.obolibrary.org/obo/GO_0102674
http://purl.obolibrary.org/obo/GO_0102675
http://purl.obolibrary.org/obo/GO_0047193
http://purl.obolibrary.org/obo/GO_0047063
http://purl.obolibrary.org/obo/GO_0050027
obsolete L-idonate 2-dehydrogenase activity database_cross_reference "MetaCyc:L-IDONATE-2-DEHYDROGENASE-RXN"
obsolete L-idonate 2-dehydrogenase activity database_cross_reference "EC:1.1.1.128"
http://purl.obolibrary.org/obo/GO_0019562
http://purl.obolibrary.org/obo/GO_0034577
http://purl.obolibrary.org/obo/GO_0034906
http://purl.obolibrary.org/obo/GO_0008769
obsolete X-His dipeptidase activity database_cross_reference "EC:3.4.13.3"
obsolete X-His dipeptidase activity database_cross_reference "MetaCyc:3.4.13.3-RXN"
http://purl.obolibrary.org/obo/GO_0034907
http://purl.obolibrary.org/obo/GO_0018524
http://purl.obolibrary.org/obo/GO_0102744
http://purl.obolibrary.org/obo/GO_0018600
http://purl.obolibrary.org/obo/GO_0018847
http://purl.obolibrary.org/obo/GO_0018595
http://purl.obolibrary.org/obo/GO_0034958
http://purl.obolibrary.org/obo/GO_0047138
obsolete aquacobalamin reductase activity database_cross_reference "EC:1.16.1.3"
obsolete aquacobalamin reductase activity database_cross_reference "MetaCyc:AQUACOBALAMIN-REDUCTASE-RXN"
http://purl.obolibrary.org/obo/GO_0047687
obsolete ascorbate 2,3-dioxygenase activity database_cross_reference "MetaCyc:ASCORBATE-23-DIOXYGENASE-RXN"
obsolete ascorbate 2,3-dioxygenase activity database_cross_reference "KEGG_REACTION:R00646"
http://purl.obolibrary.org/obo/GO_0018682
http://purl.obolibrary.org/obo/GO_0018606
http://purl.obolibrary.org/obo/GO_0034806
http://purl.obolibrary.org/obo/GO_0034808
http://purl.obolibrary.org/obo/GO_0034861
http://purl.obolibrary.org/obo/GO_0034560
http://purl.obolibrary.org/obo/GO_0034802
http://purl.obolibrary.org/obo/GO_0102234
http://purl.obolibrary.org/obo/GO_0047764
http://purl.obolibrary.org/obo/GO_0018643
http://purl.obolibrary.org/obo/GO_0018609
http://purl.obolibrary.org/obo/GO_0018575
http://purl.obolibrary.org/obo/GO_0018642
http://purl.obolibrary.org/obo/GO_0052606
obsolete chlorophyllide a oxygenase activity database_cross_reference "KEGG_REACTION:R08203"
obsolete chlorophyllide a oxygenase activity database_cross_reference "MetaCyc:RXN-7676"
http://purl.obolibrary.org/obo/GO_0034815
http://purl.obolibrary.org/obo/GO_0018839
http://purl.obolibrary.org/obo/GO_0052759
http://purl.obolibrary.org/obo/GO_0052758
http://purl.obolibrary.org/obo/GO_0052760
http://purl.obolibrary.org/obo/GO_0047786
obsolete cortisone alpha-reductase activity database_cross_reference "KEGG_REACTION:R02892"
obsolete cortisone alpha-reductase activity database_cross_reference "MetaCyc:CORTISONE-ALPHA-REDUCTASE-RXN"
http://purl.obolibrary.org/obo/GO_0102233
http://purl.obolibrary.org/obo/GO_0034795
obsolete cyclohexane monooxygenase activity database_cross_reference "KEGG_REACTION:R06945"
obsolete cyclohexane monooxygenase activity database_cross_reference "UM-BBD_reactionID:r1059"
http://purl.obolibrary.org/obo/GO_0034794
http://purl.obolibrary.org/obo/GO_0102309
http://purl.obolibrary.org/obo/GO_0018680
http://purl.obolibrary.org/obo/GO_0018681
http://purl.obolibrary.org/obo/GO_0047848
http://purl.obolibrary.org/obo/GO_0018612
http://purl.obolibrary.org/obo/GO_0034574
http://purl.obolibrary.org/obo/GO_0102745
http://purl.obolibrary.org/obo/GO_0102749
http://purl.obolibrary.org/obo/GO_0018565
http://purl.obolibrary.org/obo/GO_0047859
http://purl.obolibrary.org/obo/GO_0034550
http://purl.obolibrary.org/obo/GO_0016806
http://purl.obolibrary.org/obo/GO_0034956
http://purl.obolibrary.org/obo/GO_0034954
http://purl.obolibrary.org/obo/GO_0004584
obsolete dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity database_cross_reference "EC:2.4.1.130"
obsolete dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity database_cross_reference "MetaCyc:2.4.1.130-RXN"
http://purl.obolibrary.org/obo/GO_0051778
http://purl.obolibrary.org/obo/GO_0052711
http://purl.obolibrary.org/obo/GO_0018614
http://purl.obolibrary.org/obo/GO_0034886
http://purl.obolibrary.org/obo/GO_0018830
http://purl.obolibrary.org/obo/GO_0102722
http://purl.obolibrary.org/obo/GO_0102748
http://purl.obolibrary.org/obo/GO_0103113
http://purl.obolibrary.org/obo/GO_0018010
http://purl.obolibrary.org/obo/GO_0102329
http://purl.obolibrary.org/obo/GO_0044876
http://purl.obolibrary.org/obo/GO_0034898
http://purl.obolibrary.org/obo/GO_0018569
http://purl.obolibrary.org/obo/GO_0034570
http://purl.obolibrary.org/obo/GO_0034791
http://purl.obolibrary.org/obo/GO_0034850
http://purl.obolibrary.org/obo/GO_0034568
http://purl.obolibrary.org/obo/GO_0018466
http://purl.obolibrary.org/obo/GO_0034569
http://purl.obolibrary.org/obo/GO_0034572
http://purl.obolibrary.org/obo/GO_0033547
http://purl.obolibrary.org/obo/GO_0034845
http://purl.obolibrary.org/obo/GO_0018534
http://purl.obolibrary.org/obo/GO_0018603
http://purl.obolibrary.org/obo/GO_0034951
http://purl.obolibrary.org/obo/GO_0018941
http://purl.obolibrary.org/obo/GO_0016657
http://purl.obolibrary.org/obo/GO_0016676
http://purl.obolibrary.org/obo/GO_0016681
http://purl.obolibrary.org/obo/GO_0052583
http://purl.obolibrary.org/obo/GO_0052584
http://purl.obolibrary.org/obo/GO_0034937
http://purl.obolibrary.org/obo/GO_0052685
http://purl.obolibrary.org/obo/GO_0018647
http://purl.obolibrary.org/obo/GO_0018656
http://purl.obolibrary.org/obo/GO_0018636
http://purl.obolibrary.org/obo/GO_0018555
http://purl.obolibrary.org/obo/GO_0034934
http://purl.obolibrary.org/obo/GO_0050173
obsolete phenylalanine adenylyltransferase activity database_cross_reference "MetaCyc:PHENYLALANINE-ADENYLYLTRANSFERASE-RXN"
obsolete phenylalanine adenylyltransferase activity database_cross_reference "EC:2.7.7.54"
obsolete phenylalanine adenylyltransferase activity database_cross_reference "KEGG_REACTION:R00687"
http://purl.obolibrary.org/obo/GO_0034911
http://purl.obolibrary.org/obo/GO_0018848
http://purl.obolibrary.org/obo/GO_0018560
http://purl.obolibrary.org/obo/GO_0102932
http://purl.obolibrary.org/obo/GO_0050229
obsolete pterocarpin synthase activity database_cross_reference "MetaCyc:PTEROCARPIN-SYNTHASE-RXN"
obsolete pterocarpin synthase activity database_cross_reference "EC:1.1.1.246"
http://purl.obolibrary.org/obo/GO_0034920
http://purl.obolibrary.org/obo/GO_0034895
http://purl.obolibrary.org/obo/GO_0009444
http://purl.obolibrary.org/obo/GO_0004744
obsolete retinal isomerase activity database_cross_reference "MetaCyc:RETINAL-ISOMERASE-RXN"
obsolete retinal isomerase activity database_cross_reference "KEGG_REACTION:R02126"
http://purl.obolibrary.org/obo/GO_0160188
http://purl.obolibrary.org/obo/GO_0018567
http://purl.obolibrary.org/obo/GO_0018650
http://purl.obolibrary.org/obo/GO_0034935
http://purl.obolibrary.org/obo/GO_0018649
http://purl.obolibrary.org/obo/GO_0102746
http://purl.obolibrary.org/obo/GO_0102750
http://purl.obolibrary.org/obo/GO_0034825
http://purl.obolibrary.org/obo/GO_0102803
http://purl.obolibrary.org/obo/GO_0006125
http://purl.obolibrary.org/obo/GO_0018611
http://purl.obolibrary.org/obo/GO_0018651
http://purl.obolibrary.org/obo/GO_0034544
http://purl.obolibrary.org/obo/GO_0034872
http://purl.obolibrary.org/obo/GO_0048045
http://purl.obolibrary.org/obo/GO_0106202
http://purl.obolibrary.org/obo/GO_0106199
http://purl.obolibrary.org/obo/GO_0106201
http://purl.obolibrary.org/obo/GO_0106182
http://purl.obolibrary.org/obo/GO_0106200
http://purl.obolibrary.org/obo/GO_0106183
http://purl.obolibrary.org/obo/GO_0106188
http://purl.obolibrary.org/obo/GO_0106190
http://purl.obolibrary.org/obo/GO_0106187
http://purl.obolibrary.org/obo/GO_0106189
http://purl.obolibrary.org/obo/GO_0106191
http://purl.obolibrary.org/obo/GO_0106181
http://purl.obolibrary.org/obo/GO_0106198
http://purl.obolibrary.org/obo/GO_0106195
http://purl.obolibrary.org/obo/GO_0106197
http://purl.obolibrary.org/obo/GO_0106196
http://purl.obolibrary.org/obo/GO_0106179
http://purl.obolibrary.org/obo/GO_0106194
http://purl.obolibrary.org/obo/GO_0106193
http://purl.obolibrary.org/obo/GO_0106180
http://purl.obolibrary.org/obo/GO_0106184
http://purl.obolibrary.org/obo/GO_0022865
http://purl.obolibrary.org/obo/GO_0018981
http://purl.obolibrary.org/obo/GO_0034542
http://purl.obolibrary.org/obo/GO_0034800
http://purl.obolibrary.org/obo/GO_0034914
http://purl.obolibrary.org/obo/GO_0050359
http://purl.obolibrary.org/obo/GO_0004221
obsolete ubiquitin thiolesterase activity database_cross_reference "KEGG_REACTION:R02418"
obsolete ubiquitin thiolesterase activity database_cross_reference "MetaCyc:UBIQUITIN-THIOLESTERASE-RXN"
http://purl.obolibrary.org/obo/GO_0050372
http://purl.obolibrary.org/obo/GO_0018639
http://purl.obolibrary.org/obo/GO_0035241
Fixes #28557.