geneontology / go-ontology

Source ontology files for the Gene Ontology

http://geneontology.org/page/download-ontology

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Fixing RHEA:35811 def xref. #28523 #29240

Closed sjm41 closed 1 week ago

github-actions[bot] commented 1 week ago

Here's a diff of how these changes impact the classified ontology:

Ontology comparison

Left

Ontology IRI: http://purl.obolibrary.org/obo/go.owl
Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-11-15/go.owl
Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owl

Right

Ontology IRI: http://purl.obolibrary.org/obo/go.owl
Version IRI: http://purl.obolibrary.org/obo/go/releases/2024-11-15/go.owl
Loaded from: file:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owl

Ontology imports

Ontology annotations

pterocarpan synthase activity `http://purl.obolibrary.org/obo/GO_0140859`

Removed

pterocarpan synthase activity definition "Catalysis of the reaction: H2O + medicarpin = 4'-methoxyisoflavan-2',4,7-triol."
- database_cross_reference "RHEA:35811"
- database_cross_reference "PMID:7805842"

Added

pterocarpan synthase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
pterocarpan synthase activity definition "Catalysis of the reaction: H2O + medicarpin = 4'-methoxyisoflavan-2',4,7-triol."
- database_cross_reference "PMID:7805842"
- database_cross_reference "RHEA:35407"