(+)-camphor metabolic process http://purl.obolibrary.org/obo/GO_0018882
Removed
(+)-camphor metabolic processdefinition "The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed."
(+)-camphor metabolic processdefinition "The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed."
2,4-dichlorophenoxyacetic acid catabolic process http://purl.obolibrary.org/obo/GO_0046300
Removed
2,4-dichlorophenoxyacetic acid catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
2,4-dichlorophenoxyacetic acid catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
2,4-dichlorophenoxyacetic acid metabolic processdefinition "The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
2,4-dichlorophenoxyacetic acid metabolic processdefinition "The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
2-aminobenzenesulfonate desulfonationdefinition "The removal of the sulfonate group from 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
2-aminobenzenesulfonate desulfonationdefinition "The removal of the sulfonate group from 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
2-aminobenzenesulfonate metabolic process http://purl.obolibrary.org/obo/GO_0018868
Removed
2-aminobenzenesulfonate metabolic processdefinition "The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
2-aminobenzenesulfonate metabolic processdefinition "The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
N-cyclopropylmelamine metabolic process http://purl.obolibrary.org/obo/GO_0042201
Removed
N-cyclopropylmelamine metabolic processdefinition "The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide."
N-cyclopropylmelamine metabolic processdefinition "The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide."
Z-phenylacetaldoxime metabolic process http://purl.obolibrary.org/obo/GO_0018983
Removed
Z-phenylacetaldoxime metabolic processdefinition "The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants."
Z-phenylacetaldoxime metabolic processdefinition "The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants."
atrazine catabolic process http://purl.obolibrary.org/obo/GO_0019381
Removed
atrazine catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide."
atrazine catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide."
atrazine metabolic processdefinition "The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide."
atrazine metabolic processdefinition "The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide."
cresol metabolic process http://purl.obolibrary.org/obo/GO_0042212
Removed
cresol metabolic processdefinition "The chemical reactions and pathways involving cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote."
cresol metabolic processdefinition "The chemical reactions and pathways involving cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote."
cyanuric acid metabolic process http://purl.obolibrary.org/obo/GO_0042199
Removed
cyanuric acid metabolic processdefinition "The chemical reactions and pathways involving cyanuric acid, a suspected gastrointestinal or liver toxicant, and a potential degradation product of triazine herbicides, such as atrazine and simazine. It is widely used for the stabilization of available chlorine in swimming pool water and is also the starting compound for the synthesis of many organic derivatives."
cyanuric acid metabolic processdefinition "The chemical reactions and pathways involving cyanuric acid, a suspected gastrointestinal or liver toxicant, and a potential degradation product of triazine herbicides, such as atrazine and simazine. It is widely used for the stabilization of available chlorine in swimming pool water and is also the starting compound for the synthesis of many organic derivatives."
parathion catabolic process http://purl.obolibrary.org/obo/GO_0019339
Removed
parathion catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of parathion, a highly toxic organophosphate compound. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
parathion catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of parathion, a highly toxic organophosphate compound. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
parathion metabolic processdefinition "The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
parathion metabolic processdefinition "The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
toluene catabolic process http://purl.obolibrary.org/obo/GO_0042203
Removed
toluene catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products."
toluene catabolic processdefinition "The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products."
toluene metabolic process http://purl.obolibrary.org/obo/GO_0018970
Removed
toluene metabolic processdefinition "The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications."
toluene metabolic processdefinition "The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications."
Here's a diff of how these changes impact the classified ontology:
Ontology comparison
Left
http://purl.obolibrary.org/obo/go.owlhttp://purl.obolibrary.org/obo/go/releases/2024-11-15/go.owlfile:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-master.owl/reasoned.owlRight
http://purl.obolibrary.org/obo/go.owlhttp://purl.obolibrary.org/obo/go/releases/2024-11-15/go.owlfile:/__w/go-ontology/go-ontology/src/ontology/../../reasoned-pr.owl/reasoned.owlOntology imports
Ontology annotations
(+)-camphor catabolic process
http://purl.obolibrary.org/obo/GO_0019383Removed
Added
(+)-camphor catabolic process definition "The chemical reactions and pathways resulting in the breakdown of (+)-camphor, a bicyclic monoterpene ketone."
(+)-camphor catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
(+)-camphor catabolic process database_cross_reference "UM-BBD_pathwayID:cam"
(+)-camphor metabolic process
http://purl.obolibrary.org/obo/GO_0018882Removed
(+)-camphor metabolic process definition "The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed."
(+)-camphor metabolic process database_cross_reference "UM-BBD_pathwayID:cam"
Added
(+)-camphor metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
(+)-camphor metabolic process definition "The chemical reactions and pathways involving (+)-camphor, a bicyclic monoterpene ketone which is one of the major components in the leaves of common sage. Camphor exists in two enantiomers, but the (+)-isomer is more widely distributed."
2,4-dichlorophenoxyacetic acid catabolic process
http://purl.obolibrary.org/obo/GO_0046300Removed
Added
2,4-dichlorophenoxyacetic acid catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
2,4-dichlorophenoxyacetic acid catabolic process database_cross_reference "UM-BBD_pathwayID:2,4-d"
2,4-dichlorophenoxyacetic acid catabolic process definition "The chemical reactions and pathways resulting in the breakdown of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
database_cross_reference "UM-BBD_pathwayID:2,4-d"
database_cross_reference "GOC:ai"
2,4-dichlorophenoxyacetic acid metabolic process
http://purl.obolibrary.org/obo/GO_0018901Removed
2,4-dichlorophenoxyacetic acid metabolic process database_cross_reference "UM-BBD_pathwayID:2,4-d"
2,4-dichlorophenoxyacetic acid metabolic process definition "The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
Added
2,4-dichlorophenoxyacetic acid metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
2,4-dichlorophenoxyacetic acid metabolic process definition "The chemical reactions and pathways involving 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds."
2-aminobenzenesulfonate desulfonation
http://purl.obolibrary.org/obo/GO_0019490Removed
Added
2-aminobenzenesulfonate desulfonation definition "The removal of the sulfonate group from 2-aminobenzenesulfonate, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
2-aminobenzenesulfonate desulfonation database_cross_reference "UM-BBD_pathwayID:abs"
2-aminobenzenesulfonate desulfonation term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
2-aminobenzenesulfonate metabolic process
http://purl.obolibrary.org/obo/GO_0018868Removed
2-aminobenzenesulfonate metabolic process definition "The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
2-aminobenzenesulfonate metabolic process database_cross_reference "UM-BBD_pathwayID:abs"
Added
2-aminobenzenesulfonate metabolic process definition "The chemical reactions and pathways involving 2-aminobenzenesulfonate, aniline-o-sulfonic acid, an aromatic sulfonate used in organic synthesis and in the manufacture of various dyes and medicines."
2-aminobenzenesulfonate metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity
http://purl.obolibrary.org/obo/GO_0018755Added
2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
2-chloro-4-hydroxy-6-amino-1,3,5-triazine aminohydrolase activity database_cross_reference "UM-BBD_reactionID:r1414"
3-phenylpropionate dioxygenase activity
http://purl.obolibrary.org/obo/GO_0008695Removed
Added
3-phenylpropionate dioxygenase activity database_cross_reference "UM-BBD_enzymeID:e0307"
3-phenylpropionate dioxygenase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
N-cyclopropylmelamine metabolic process
http://purl.obolibrary.org/obo/GO_0042201Removed
Added
N-cyclopropylmelamine metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
N-cyclopropylmelamine metabolic process definition "The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide."
Z-phenylacetaldoxime metabolic process
http://purl.obolibrary.org/obo/GO_0018983Removed
Added
Z-phenylacetaldoxime metabolic process definition "The chemical reactions and pathways involving Z-phenylacetaldoxime, a member of the glucosinolate group of compounds, a class of natural products that are gaining increasing interest as cancer-preventing agents and crop protectants."
Z-phenylacetaldoxime metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
atrazine catabolic process
http://purl.obolibrary.org/obo/GO_0019381Removed
atrazine catabolic process definition "The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide."
database_cross_reference "GOC:jl"
database_cross_reference "UM-BBD_pathwayID:atr"
Added
atrazine catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
atrazine catabolic process database_cross_reference "UM-BBD_pathwayID:atr"
atrazine catabolic process definition "The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide."
database_cross_reference "GOC:jl"
database_cross_reference "MetaCyc:PWY-5724"
atrazine metabolic process
http://purl.obolibrary.org/obo/GO_0018873Removed
atrazine metabolic process database_cross_reference "UM-BBD_pathwayID:atr"
atrazine metabolic process definition "The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide."
Added
atrazine metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
atrazine metabolic process definition "The chemical reactions and pathways involving atrazine, a triazine ring-containing compound, widely used as a herbicide."
cresol metabolic process
http://purl.obolibrary.org/obo/GO_0042212Removed
Added
cresol metabolic process definition "The chemical reactions and pathways involving cresol, a mixture of the aromatic alcohol isoforms o-, p-, and m-cresol, which is obtained from coal tar or petroleum. The isomers are used as disinfectants, textile scouring agents, surfactants and as intermediates in the manufacture of salicylaldehyde, coumarin, and herbicides as well as being a major component of creosote."
cresol metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
cyanuric acid metabolic process
http://purl.obolibrary.org/obo/GO_0042199Removed
Added
cyanuric acid metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
cyanuric acid metabolic process definition "The chemical reactions and pathways involving cyanuric acid, a suspected gastrointestinal or liver toxicant, and a potential degradation product of triazine herbicides, such as atrazine and simazine. It is widely used for the stabilization of available chlorine in swimming pool water and is also the starting compound for the synthesis of many organic derivatives."
dimethyl sulfoxide reductase complex
http://purl.obolibrary.org/obo/GO_0009390Removed
Added
dimethyl sulfoxide reductase complex definition "An enzyme complex that catalyzes the formation of dimethyl sulfide from dimethyl sulfoxide."
database_cross_reference "PMID:21357619"
database_cross_reference "PMID:3280546"
dimethyl sulfoxide reductase complex term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
hexachlorocyclohexane metabolic process
http://purl.obolibrary.org/obo/GO_0019497Added
hexachlorocyclohexane metabolic process database_cross_reference "UM-BBD_pathwayID:ghch"
hexachlorocyclohexane metabolic process database_cross_reference "UM-BBD_pathwayID:hch"
hexachlorocyclohexane metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
methyl tertiary butyl ether 3-monooxygenase activity
http://purl.obolibrary.org/obo/GO_0018591Added
methyl tertiary butyl ether 3-monooxygenase activity database_cross_reference "UM-BBD_reactionID:r1023"
methyl tertiary butyl ether 3-monooxygenase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
parathion catabolic process
http://purl.obolibrary.org/obo/GO_0019339Removed
Added
parathion catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
parathion catabolic process database_cross_reference "UM-BBD_pathwayID:pthn"
parathion catabolic process definition "The chemical reactions and pathways resulting in the breakdown of parathion, a highly toxic organophosphate compound. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
parathion metabolic process
http://purl.obolibrary.org/obo/GO_0018952Removed
parathion metabolic process database_cross_reference "UM-BBD_pathwayID:pthn"
parathion metabolic process definition "The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
Added
parathion metabolic process definition "The chemical reactions and pathways involving parathion, a highly toxic organophosphate compound formerly used as a broad spectrum insecticide, acaricide, fumigant and nematocide. Degradation of parathion by sunlight or liver enzymes can result in the formation of the active compound paraoxon which interferes with the nervous system through cholinesterase inhibition."
parathion metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
phenanthrene-9,10-epoxide hydrolase activity
http://purl.obolibrary.org/obo/GO_0019119Added
phenanthrene-9,10-epoxide hydrolase activity database_cross_reference "UM-BBD_reactionID:r0496"
phenanthrene-9,10-epoxide hydrolase activity database_cross_reference "UM-BBD_reactionID:r0560"
phenanthrene-9,10-epoxide hydrolase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
phenanthrene-epoxide hydrolase activity
http://purl.obolibrary.org/obo/GO_0019118Added
phenanthrene-epoxide hydrolase activity database_cross_reference "UM-BBD_reactionID:r0536"
phenanthrene-epoxide hydrolase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
phenanthrene-epoxide hydrolase activity database_cross_reference "UM-BBD_reactionID:r0535"
tert-butanol 2-monooxygenase activity
http://purl.obolibrary.org/obo/GO_0018594Added
tert-butanol 2-monooxygenase activity term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
tert-butanol 2-monooxygenase activity database_cross_reference "UM-BBD_reactionID:r0615"
toluene catabolic process
http://purl.obolibrary.org/obo/GO_0042203Removed
Added
toluene catabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)
toluene catabolic process definition "The chemical reactions and pathways resulting in the breakdown of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products."
toluene catabolic process database_cross_reference "UM-BBD_pathwayID:tol"
toluene metabolic process
http://purl.obolibrary.org/obo/GO_0018970Removed
Added
toluene metabolic process definition "The chemical reactions and pathways involving toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products such as gasoline and commonly used as a paint thinning agent and in other solvent applications."
toluene metabolic process term tracker item "https://github.com/geneontology/go-ontology/issues/28523"^^[anyURI](http://www.w3.org/2001/XMLSchema#anyURI)