Closed gocentral closed 8 years ago
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I am fine with all of these with 2 comments: 1) Can we use pituitary gland development etc as the primary terms to be consistent with the anatomical dictionaries. The FMA, the adult mouse anatomical dictionary and the medaka anatomies in OBO use pituitary as the primary term with hypophysis cerebri as a synonym.Zebrafish uses hypophysis. Maybe we can get zebrafish to change their primary term name? 2) Could we add a sentence describing what the pituitary, neurophysis and adenophysis are?
Original comment by: ukemi
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In many organisms the terms anterior and posterior in regards to the pituitary are not valid so adenohypophysis and neurohypophysis are used to describe the structures and their makeup. The name hypophysis is much more prevalent in Gray's Anatomy. The vasculature which perfuses the structure is also called the hypophyseal artery and the hypothalamic-hypophyseal portal veins. So it is more consistent to call the structure composed of the adenohypophysis and neurohypophysis enervated by the hyppophyseal artery and hypothalamic-hypophyseal portal veins the hypophysis. I can write a short description for each term if that is desirable most of the time GO seems to discourage this. Some additional info: http://education.yahoo.com/reference/gray/subjects/subject?id=184\#25
Original comment by: cerivs
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Here are short descriptions of the adenohypophysis and neurohypophysis:
adenohypophysis This lobe of the hypophysis derived from ectoderm and contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin.
neurohypophysis An extension of the hypothalamus that is composed largely of the axons of hypothalamic neurons which extend downward as a large bundle behind the adenohypophysis. These neurons secrete antidiuretic hormone (vasopressin) and oxytocin.
Ceri
Original comment by: cerivs
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Here are short descriptions of the adenohypophysis and neurohypophysis:
adenohypophysis This lobe of the hypophysis derived from ectoderm and contains cells that produce prolactin, growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone and proopiomelanocortin.
neurohypophysis An extension of the hypothalamus that is composed largely of the axons of hypothalamic neurons which extend downward as a large bundle behind the adenohypophysis. These neurons secrete antidiuretic hormone (vasopressin) and oxytocin.
Ceri
Original comment by: cerivs
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Dear Ceri
I am fine with your definitions and DAG structure. Here are other possible descriptions of adenohypophysis and neurohypophysis. Can they be useful?
adenohypophysis
The adenohypophysis is a pea-size gland of the endocrine system and comprises the anterior lobe of the pituitary gland. Under the influence of the hypothalamus, the adenohypophysis produces and secretes several peptide hormones, for example thyroid-stimulating hormone and follicle-stimulating hormone, that regulate many physiological processes including stress, growth, and reproduction.
neurohypophysis
The neurohypophysis comprises the posterior lobe of the pituitary gland and it is part of the endocrine system. It consists mainly of axons of hypothalamic neurons which extend downward as a large bundle behind the adenohypophysis. These neurons secrete hormones like vasopressin and oxytocin into the capillaries of the hypophyseal circulation.
Thank you Erika
Original comment by: arike
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This request overlaps with SF 11511535, which has been closed. Once the new Neurodevelopment terms are committed..hopefully next week (~8/15), it would be good if someone could tackle this request. We'd really like to use these terms. -Doug
Original comment by: doughowe
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Hi Doug,
Which is SF 11511535? The search facility on sourceforge won't find it for me.
Thanks,
Jennifer
Original comment by: jenclark
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Sorry...typo...it is:
1511535 pituitary gland development
Original comment by: doughowe
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Hi,
We already have terms 'neurophysis development' and 'adenophysis development'. Should I be adding 'neurohypophysis development' and 'adenohypophysis development' as synonyms or new terms?
Thanks,
Jennifer
Original comment by: jenclark
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Would I be right in adding 'hypophysis development' as an exact synonym of 'pituitary gland development'?
http://cancerweb.ncl.ac.uk/cgi-bin/omd?hypophysis
Thanks,
Jennifer
Original comment by: jenclark
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Ah, I just found the note above:
"hypophysis development exact synonym: pituitary gland development"
That's one problem solved.
Thanks,
Jennifer
Original comment by: jenclark
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Concluding remarks:
These should be used as exact synonyms adenophysis = adenohypophysis = anterior pituitary gland neurophysis = neurohypophysis = posterior pituitary gland hypophysis = pituitary = pituitary gland
I think you could also add the part_of chain going up the tree for the "x morphogenesis" terms as in nervous system morphogenesis ---[p]central nervous system morphogenesis ------[p]brain morphogenesis ----------[p]forebrain morphogenesis -------------[p]diencephalon morphogenesis -----------------[p]pituitary gland morphogenesis ---------------------[p]adenophysis morphogenesis
I would NOT do that for the formation terms however.
-Doug
Original comment by: doughowe
Original comment by: jenclark
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Terms added:
[Term] id: GO:0048855 name: adenohypophysis morphogenesis namespace: biological_process def: "The process by which the anatomical structures of adenohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." [GOC:cvs, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "adenophysis morphogenesis" [] exact_synonym: "anterior pituitary gland morphogenesis" [] exact_synonym: "anterior pituitary morphogenesis" [] relationship: part_of GO:0021984 ! adenohypophysis development relationship: part_of GO:0048850 ! hypophysis morphogenesis
[Term] id: GO:0048847 name: adenohypophysis formation namespace: biological_process def: "The process that gives rise to adenohypophysis. This process pertains to the initial formation of a structure from unspecified parts.The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus." [GOC:cvs, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "adenophysis formation" [] exact_synonym: "anterior pituitary formation" [] exact_synonym: "anterior pituitary gland formation" [] is_a: GO:0048646 ! anatomical structure formation relationship: part_of GO:0048855 ! adenohypophysis morphogenesis
[Term] id: GO:0048848 name: neurohypophysis morphogenesis namespace: biological_process def: "The process by which the anatomical structures of neurohypophysis are generated and organized. Morphogenesis pertains to the creation of form. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." [GOC:cls, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "neurophysis morphogenesis" [] exact_synonym: "posterior pituitary gland morphogenesis" [] exact_synonym: "posterior pituitary morphogenesis" [] relationship: part_of GO:0021985 ! neurohypophysis development relationship: part_of GO:0048850 ! hypophysis morphogenesis
[Term] id: GO:0048849 name: neurohypophysis formation namespace: biological_process def: "The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts.The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation." [GOC:cls, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "neurophysis formation" [] exact_synonym: "posterior pituitary formation" [] exact_synonym: "posterior pituitary gland formation" [] is_a: GO:0048646 ! anatomical structure formation relationship: part_of GO:0048848 ! neurohypophysis morphogenesis
[Term] id: GO:0048850 name: hypophysis morphogenesis namespace: biological_process def: "The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands." [GOC:cls, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "hypophysis morphogenesis" [] exact_synonym: "pituitary gland morphogenesis" [] relationship: part_of GO:0021983 ! pituitary gland development relationship: part_of GO:0048852 ! diencephalon morphogenesis
[Term] id: GO:0048851 name: hypophysis formation namespace: biological_process def: "The process by which the anatomical structures of the hypophysis are generated and organized. Morphogenesis pertains to the creation of form. The hypophysis is an endocrine gland that secretes hormones that regulate many other glands." [GOC:cls, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "hypophysis formation" [] exact_synonym: "pituitary gland formation" [] is_a: GO:0048646 ! anatomical structure formation relationship: part_of GO:0048850 ! hypophysis morphogenesis
[Term] id: GO:0048852 name: diencephalon morphogenesis namespace: biological_process def: "The process by which the anatomical structures of diencephalon are generated and organized. Morphogenesis pertains to the creation of form. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex." [GOC:cls, GOC:dgh, GOC:dph, GOC:jic, GOC:mtg_15jun06, ISBN:0838580343] relationship: part_of GO:0021536 ! diencephalon development relationship: part_of GO:0048853 ! forebrain morphogenesis
[Term] id: GO:0048853 name: forebrain morphogenesis namespace: biological_process def: "The process by which the anatomical structures of the forebrain are generated and organized. Morphogenesis pertains to the creation of form. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)." [GOC:cvs, GOC:dgh, GOC:dph, GOC:jic] exact_synonym: "prosencephalon development" [] relationship: part_of GO:0030900 ! forebrain development relationship: part_of GO:0048854 ! brain morphogenesis
[Term] id: GO:0048854 name: brain morphogenesis namespace: biological_process def: "The process by which the anatomical structures of brain are generated and organized. Morphogenesis pertains to the creation of form. The brain is one of the two components of the central nervous system and is the center of thought and emotion. It is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.)." [GOC:dgh, GOC:jic, GOC:jic] is_a: GO:0009887 ! organ morphogenesis relationship: part_of GO:0007420 ! brain development
Thanks,
Jennifer
Original comment by: jenclark
Original comment by: jenclark
Original comment by: cooperl09
-hypophysis development --[p]hypophysis morphogenesis ---[p]hypophysis formation --[p]adenohypophysis development ---[p]adenohypophys morphogenesis ----[p]adenohypophys formation --[p]neurohypophysis development ---[p]neurohypophysis morphogenesis ----[p]neurohypophysis formation
forebrain development (GO:0030900) --[p]neurohypophysis development ---[p]neurohypophysis morphogenesis ----[p]neurohypophysis formation
gland development (GO:0048732) --[i]hypophysis development
endocrine system development (GO:0035270) --[p]hypophesis development
hypophysis development exact synonym: pituitary gland development exact synonym: pituitary developoment def: The process whose specific outcome is the progression of the hypophysis over time, from its formation to the mature structure.
hypophysis morphogenesis exact synonym: pituitary gland morphogenesis exact synonym: pituitary morphogenesis def: The process by which the anatomical structures of hypophysis are generated and organized. Morphogenesis pertains to the creation of form.
hypophysis formation exact synonym: pituitary gland formation exact synonym: pituitary formation def: The process that gives rise to the hypophysis. This process pertains to the initial formation of a structure from unspecified parts.
adenohypophysis development exact synonym: anterior pituitary development exact synonym: anterior pituitary gland development def: The process whose specific outcome is the progression of the adenohypophysis over time, from its formation to the mature structure.
adenohypophysis morphogenesis exact synonym: anterior pituitary morphogenesis exact synonym: anterior pituitary gland morphogenesis def: The process by which the anatomical structures of adenohypophysis are generated and organized. Morphogenesis pertains to the creation of form.
adenohypophysis formation exact synonym: anterior pituitary formation exact synonym: anterior pituitary gland formation def: The process that gives rise to adenohypophysis. This process pertains to the initial formation of a structure from unspecified parts.
neurohypophysis development exact synonym: posterior pituitary development exact synonym: posterior pituitary gland development def: The process whose specific outcome is the progression of the neurohypophysis over time, from its formation to the mature structure.
neurohypophysis morphogenesis exact synonym: posterior pituitary morphogenesis exact synonym: posterior pituitary gland morhogenesis def: The process by which the anatomical structures of neurohypophysis are generated and organized. Morphogenesis pertains to the creation of form.
neurohypophysis formation exact synonym: posterior pituitary formation exact synonym: posterior pituitary gland formation def: The process that gives rise to neurohypophysis. This process pertains to the initial formation of a structure from unspecified parts.
Reported by: cerivs
Original Ticket: "geneontology/ontology-requests/3323":https://sourceforge.net/p/geneontology/ontology-requests/3323