geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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ntr: sorbose reductase #3405

Closed gocentral closed 9 years ago

gocentral commented 18 years ago

Hi,

I'd like to request an MF term for an enzyme that just recently got an EC number. The following info is from the IUBMB website

http://www.chem.qmul.ac.uk/iubmb/enzyme/newEC1.html\#111289

EC 1.1.1.289

Common name: sorbose reductase

Reaction: D-glucitol + NADP+ = L-sorbose + NADPH + H+

Systematic name: D-glucitol:NADP+ oxidoreductase

Comments: The reaction occurs predominantly in the reverse direction. This enzyme can also convert D-fructose into D-mannitol, but more slowly. Belongs in the short-chain dehydrogenase family.

References:

  1. Greenberg, J.R., Price, N.P., Oliver, R.P., Sherman, F. and Rustchenko, E. Candida albicans SOU1 encodes a sorbose reductase required for L- sorbose utilization. Yeast 22 (2005) 957-969. [PMID: 16134116]

  2. Sugisawa, T., Hoshino, T. and Fujiwara, A. Purification and properties of NADPH-linked L-sorbose reductase from Gluconobacter melanogenus N44-1. Agric. Biol. Chem. 55 (1991) 2043-2049.

  3. Shinjoh, M., Tazoe, M. and Hoshino, T. NADPH-dependent L- sorbose reductase is responsible for L-sorbose assimilation in Luconobacter suboxydans IFO 3291. J. Bacteriol. 184 (2002) 861-863. [PMID: 11790761]


I think the new term should be a child of: EC:1.1.1 > GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ; GO:0016616

A suggested definition would be: Catalysis of the reaction: L-sorbose + NADPH + H+ = D-glucitol + NADP+. The reaction may occur, to a minor extent, in the reverse direction.

Thanks, Maria

Reported by: mariacostanzo

Original Ticket: "geneontology/ontology-requests/3420":https://sourceforge.net/p/geneontology/ontology-requests/3420

gocentral commented 18 years ago

Logged In: YES user_id=436423

added sorbose reductase activity GO:0032115

Original comment by: mah11

gocentral commented 18 years ago

Original comment by: mah11