geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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Def: voltage-gated ion-selective channel activity #4706

Closed gocentral closed 9 years ago

gocentral commented 16 years ago

I don't know anything about ion channels... just wondered if 'voltage-gated ion-selective channel activity' GO:0008308 (currently undefined) and 'voltage-gated ion channel activity' GO:0005244 are the same thing?

If not, a definition for the former would help.

Thanks,

Susan

Reported by: stweedie

Original Ticket: "geneontology/ontology-requests/4721":https://sourceforge.net/p/geneontology/ontology-requests/4721

gocentral commented 16 years ago

Logged In: YES user_id=436423 Originator: NO

In a quick and unscientific Google search, the GO term was the most common hit, and the next were papers on bacterial sodium channels.

I'll draw the attention of the transporter group to this, but I hereby vote to merge GO:0008308 into GO:0005244.

m

Original comment by: mah11

gocentral commented 16 years ago

Logged In: YES user_id=631592 Originator: NO

I wonder based on the placement in the graph if

voltage-gated ion-selective channel activity [GO:0008308] isn't a typo and should be voltage-gated anion-selective channel activity [GO:0008308]

David

Original comment by: ukemi

gocentral commented 16 years ago

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It's possible ... and in that case, it's essentially the same as the newer term 'voltage-gated anion channel activity' (GO:0022844). Might be wise to retain the older ID upon merging.

Original comment by: mah11

gocentral commented 16 years ago

Original comment by: mah11

gocentral commented 16 years ago

Logged In: YES user_id=436423 Originator: NO

merged GO:0022844 into GO:0008308; used 'voltage-gated anion channel activity' as the name

Original comment by: mah11

gocentral commented 16 years ago

Original comment by: mah11