geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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Product name change: arabinono-1,4-lactone oxidase activity #5732

Closed gocentral closed 9 years ago

gocentral commented 15 years ago

Product name change in definition of GO term D-arabinono-1,4-lactone oxidase activity (MF GO:0003885)

Current GO term definition: Catalysis of the reaction: D-arabinono-1,4-lactone + O2 = D-erythro-ascorbate + H2O2.

Proposed new GO term definition: Catalysis of the reaction: D-arabinono-1,4-lactone + O2 = dehydro-D-arabinono-1,4-lactone + H2O2

The International Union of Biochemistry and Molecular Biology (IUBMB) recommended changing the product name for the reaction catalyzed by D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from D-erythroascorbate to dehydro-D-arabinono-1,4-lactone because researchers identified the product as a 5 carbon compound and D-erythroascorbate is a 6-carbon compound. The IUBMB has contacted other databases such as PubChem, Kegg, Chebi and ExPASy and they have corrected their dbs accordingly. I am suggesting that we change GO to be consistent with the changes being propagated throughout the other databases.

http://www.chem.qmul.ac.uk/iubmb/enzyme/EC1/1/3/37.html

thanks, Cindy

Reported by: cjkrieger

Original Ticket: "geneontology/ontology-requests/5750":https://sourceforge.net/p/geneontology/ontology-requests/5750

gocentral commented 15 years ago

Done; thanks for bringing it to our attention.

Original comment by: mah11

gocentral commented 15 years ago

Original comment by: mah11