geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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Phage recognition #610

Closed gocentral closed 9 years ago

gocentral commented 21 years ago

Hi,

Is it possible to have new term

'phage recognition' perhaps a child of response to viruses/viral perception... could call it 'phage perception'. SPKW Definition: Protein involved in phage recognition. Necessary for adsorption of the virion into the host cell.

Also need term for 'phage maturation' could be child/synonym to GO:0019067 'viral assembly, maturation, egress, and release'

SPKW Definition Protein involved in phage maturation, the formation of complete phage viruses ready for release.

cheers Ev

Reported by: ecamon

Original Ticket: "geneontology/ontology-requests/610":https://sourceforge.net/p/geneontology/ontology-requests/610

gocentral commented 21 years ago

Logged In: YES user_id=473796

For phage recognition, we have 'viral entry ; GO:0046718' - the process by which a virion enters a host cell, including virion attachment and penetration. Would that work? The children, virion attachment and virion penetration go into greater depth if you want to be more specific. I presume the term is talking about a viral protein rather than one in the host...?

For phage maturation, we have 'viral particle maturation ; GO:0019075' - the assembly of the component viral parts into an infectious virion.

Original comment by: girlwithglasses

gocentral commented 21 years ago

Original comment by: girlwithglasses

gocentral commented 21 years ago

Logged In: YES user_id=463625

Hi,

I have checked the use of this keyword in SWALL...and agree to use these GO terms.

cheers Evelyn

Original comment by: ecamon

gocentral commented 21 years ago

Logged In: YES user_id=473796

Thank you!

Original comment by: girlwithglasses

gocentral commented 21 years ago

Original comment by: girlwithglasses