geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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cilium motion terms #6190

Closed gocentral closed 9 years ago

gocentral commented 15 years ago

GO:0006928 cell motion NEW cilium motion NEW cilium beating GO:0060287 cilium beating involved in determination of left/right asymmetry (name change)
NEW cilium beating involved in otolith formation + [R] NEW regulation of cilium beating
NEW regulation of cilium beat frequency

GO:0060294 cilium motion involved in ciliary motility (name change) [R] NEW regulation of cilium motion NEW positive regulation of cilium motion NEW negative regulation of cilium motion

NEW cilium motion Motion of cilia mediated by motor proteins.

NEW cilium beating Motion of cilia of an epithelial cell. The cilia motion usually is coordinated between many cells, and serves to move fluid.

NEW regulation of cilium beating
Any process that modulates the rate frequency or extent of cilium motion involved in cilium beating.

NEW regulation of cilium beat frequency Any process that modulates the frequency of cilium motion involved in cilium beating.

NEW positive regulation of cilium motion Any process that activates or increases the frequency, rate or extent of the cilium motion.

NEW negative regulation of cilium motion Any process that stops, prevents, or reduces the frequency, rate or extent of cilium motion.

NEW cilium beating involved in otolith formation The beating of cilia of inner ear epithelial cells resulting the aggregation of otlolith seed particles.

GO:0032475 otolith formation Part_of NEW cilium beating involved in formation of an otolith

GO:0051270 regulation of cell motion
NEW regulation of cilium motion NEW regulation of cilium beating
NEW regulation of cilium beat frequency

GO:0065008 regulation of biological quality
NEW regulation of cilium beat frequency

[R]=regulates

Need a cilium beating term and a regulation of cilium beat frequency. Tried to organize the motion terms consistently.

Reported by: cerivs

Original Ticket: geneontology/ontology-requests/6209

gocentral commented 15 years ago

In the SF item that led to the current terms, there was a 'cilium motion' term under consideration for a while, but it didn't end up getting added. Reading over the old item, I think the reason may have been that we didn't take all cases of cilium motion into account, but I'll email the curators who did most of that work to look at this new item and comment.

the older item is https://sourceforge.net/tracker/index.php?func=detail&aid=1766338&group\_id=36855&atid=440764

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Original comment by: mah11

gocentral commented 15 years ago

Original comment by: mah11

gocentral commented 15 years ago

Tabbed file with proposed terms

Original comment by: cerivs

gocentral commented 15 years ago

Oops looks like the tabs in the above didn't paste in for some reason. Attached the file with the tabbed trees.

Original comment by: cerivs

gocentral commented 14 years ago

Added:

epithelial cell cilium movement ; GO:0003351 regulation of cilium movement ; GO:0003352 positive regulation of cilium movement ; GO:0003353 negative regulation of cilium movement ; GO:0003354 cilium movement involved in otolith formation ; GO:0003355

Original comment by: ukemi

gocentral commented 14 years ago

Added:

regulation of cilium beat frequency ; GO:0003356

Original comment by: ukemi

gocentral commented 14 years ago

Original comment by: ukemi