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geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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snRNA methyltransferase activity #6671

Closed gocentral closed 9 years ago

gocentral commented 14 years ago

Hi Please could this term be created as a child of:

GO:0008173 RNA methyltransferase activity >new term snRNA methyltransferase activity Synonym: small nuclear RNA methyltransferase activity

For the annotation of Q96RS0 TGS1 PMID: 16687569

Thanks

Ruth

Reported by: RLovering

Original Ticket: geneontology/ontology-requests/6691

gocentral commented 14 years ago

Original comment by: mah11

gocentral commented 14 years ago

Having skimmed the paper, I see that the methyltransferase in question is the one that hypermethylates the cap on some RNAs, including both snRNAs and snoRNAs. Because it's the same reaction for both types of RNA, I've used 'snRNA methyltransferase' as a related synonym.

The term I added is ' RNA trimethylguanosine synthase activity' GO:0071164.

Also see SF 1655946, which I refer to more extensively in the nsnRNA methylation item: https://sourceforge.net/tracker/index.php?func=detail&aid=1655946&group\_id=36855&atid=440764

Original comment by: mah11

gocentral commented 14 years ago

Original comment by: mah11

gocentral commented 14 years ago

Original comment by: mah11

gocentral commented 12 years ago

See proposed edits in this related SF item:

https://sourceforge.net/tracker/index.php?func=detail&aid=1655946&group\_id=36855&atid=440764

Plan to do edits at the end of this week (by Fri 15th June 2012).

Original comment by: rebeccafoulger

gocentral commented 12 years ago

Original comment by: rebeccafoulger