geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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UDP-glucuronic acid decarboxylase #686

Closed gocentral closed 9 years ago

gocentral commented 21 years ago

Hi,

Im doing GO assignments for Cryptococcus neoformans and Id need a new GO term:

Name: UDP-glucuronic acid decarboxylase Type: function Definition: Catalysis of the reaction: UDP-D-glucuronic acid = UDP-D-xylose + carbon dioxide. synonyms: UDP-glucuronate decarboxylase

References:

The relative enzymatic activity is deposited in ENZYME: http://us.expasy.org/cgi-bin/nicezyme.pl?4.1.1.35

The relative biochemical pathway is shown in
http://us.expasy.org/cgi-bin/show\_image?B3

The publication describing the first characterization of UDP-glucuronic acid decarboxylase is PMID:11593010 http://www.ncbi.nlm.nih.gov/entrez/query.fcgi? cmd=Retrieve&db=PubMed&list_uids=11593010&dopt= Abstract

Place in the graph:

GO:0003673 : Gene_Ontology
GO:0008150 : biological_process GO:0005575 : cellular_component GO:0003674 : molecular_function GO:0003824 : enzyme GO:0016829 : lyase GO:0016830 : carbon-carbon lyase GO:0016831 : carboxy-lyase UDP-glucuronic acid decarboxylase

Please let me know if you have any comments. Thanks very much!

Paola Roncaglia

Reported by: paolar

Original Ticket: "geneontology/ontology-requests/687":https://sourceforge.net/p/geneontology/ontology-requests/687

gocentral commented 21 years ago

Original comment by: girlwithglasses

gocentral commented 21 years ago

Original comment by: jl242

gocentral commented 21 years ago

Logged In: YES user_id=735846

New term: UDP-glucuronic acid decarboxylase activity GO:0048040

(is_a child of GO:0016831 : carboxy-lyase)

Definition: Catalysis of the reaction: UDP-D-glucuronic acid = UDP-D- xylose + carbon dioxide. synonym: UDP-glucuronate decarboxylase activity

Original comment by: jenclark

gocentral commented 21 years ago

Original comment by: jenclark