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geneontology / go-ontology

Source ontology files for the Gene Ontology
http://geneontology.org/page/download-ontology
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GO:0009522 photosystem I #8812

Closed gocentral closed 9 years ago

gocentral commented 13 years ago

Please may you amend taxon constraint to iclude the red algae

Reported by: prudencemutowo

Original Ticket: geneontology/ontology-requests/8600

gocentral commented 13 years ago

GO:0009522 inherits its taxon restrictions from 'thylakoid'

http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0009522

So fixing thylakoid will fix this one. Therefore I'll close this SF.

Original comment by: rebeccafoulger

gocentral commented 13 years ago

Changed all thylakoid/chlorphyll/photosynthesis taxon restrictions to 'never_in Metazoa' to allow for photosynthesising algae.

Did it this way rather than adding another restriction to the current 'only_in taxon union' stanzas, because many of the algae are direct children of 'Eukaryota' in the taxonomic tree, and the main point of the taxon restrictions are to ensure that animals aren't annotated with photosynthesis terms.

Also removed redundant restrictions, where a restriction is already in place for the parent.

Original comment by: rebeccafoulger

gocentral commented 13 years ago

Original comment by: rebeccafoulger