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geneontology / go-releases

Tasks and notes for monthly GO releases
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If there are large decreases in RNA entities, see https://github.com/geneontology/neo/issues/118#issuecomment-2000708395 #71

Closed pgaudet closed 2 months ago

pgaudet commented 2 months ago

March 28 2024 snapshot: few changes WRT RNA entities:

CHANGES IN ANNOTATED BIOENTITIES BY TYPE (ALL) |   |   -- | -- | -- mRNA | -2 / 13953 | -0.01% snRNA | -121 / 8085 | -1.50% lncRNA_gene | 1 / 6849 | 0.01% rRNA | 37 / 6771 | 0.55% tRNA | -117 / 5492 | -2.13% snoRNA | -78 / 5263 | -1.48% SRP_RNA | -620 / 1241 | -49.96% miRNA | -10 / 948 | -1.05% ncRNA | -3 / 460 | -0.65% tRNA_gene | 0 / 456 | 0.00% miRNA_gene | 0 / 450 | 0.00% antisense_lncRNA | 0 / 190 | 0.00% RNA | 0 / 147 | 0.00% snoRNA_gene | 0 / 126 | 0.00% ncRNA_gene | 0 / 62 | 0.00% RNase_P_RNA | -1 / 58 | -1.72% RNase_MRP_RNA | 1 / 23 | 4.35% antisense_RNA | 4 / 22 | 18.18% telomerase_RNA | 0 / 18 | 0.00% lnc_RNA | 0 / 13 | 0.00% snRNA_gene | 0 / 11 | 0.00% lincRNA_gene | 0 / 8 | 0.00% rRNA_gene | 0 / 8 | 0.00% sense_intronic_ncRNA_gene | 0 / 6 | 0.00% RNase_P_RNA_gene | 0 / 3 | 0.00% scRNA | 0 / 3 | 0.00% lincRNA | 2 / 2 | 100.00% piRNA | 0 / 2 | 0.00% scRNA_gene | 0 / 2 | 0.00% RNase_MRP_RNA_gene | 0 / 1 | 0.00% SRP_RNA_gene | 0 / 1 | 0.00% guide_RNA | 0 / 1 | 0.00% sense_overlap_ncRNA_gene | 0 / 1 | 0.00% telomerase_RNA_gene | 0 / 1 | 0.00% tmRNA | 0 / 1 | 0.00%
pgaudet commented 2 months ago

I dont notice anything unusual in the stats so far.