2024-03-21 snapshot Major changes - Githubissues

geneontology / go-releases

Tasks and notes for monthly GO releases

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2024-03-21 snapshot Major changes #74

Closed pgaudet closed 2 months ago

pgaudet commented 3 months ago

SynGO | 1457 / 11204 | 13.00% >> New load :)
TreeGrafter | 267176 / 267176 | 100.00%: New data :)

To check:

Ensembl | -17294 / 315759 | -5.48%
UniProt | -62110 / 896330 | -6.93%
JCVI | -21344 / 90 | -23715.56%: Mostly ND and ISS removed; only 90 left
PomBase | 6536 / 58777 | 11.12%: change in new TreeGrafter annotations for Japonicus
RNAcentral | -9884 / 96821 | -10.21%; expected [link to ticket]

IEAs: (many should be coming from TreeGrafter NCBITaxon:9606|Homo sapiens | -4798 NCBITaxon:10116|Rattus norvegicus | 19779 NCBITaxon:10090|Mus musculus | -6712 NCBITaxon:3702|Arabidopsis thaliana | -17 NCBITaxon:7955|Danio rerio | -1003 NCBITaxon:6239|Caenorhabditis elegans | 642 NCBITaxon:559292|Saccharomyces cerevisiae S288C | -14 NCBITaxon:7227|Drosophila melanogaster | -182 NCBITaxon:44689|Dictyostelium discoideum | -2180 NCBITaxon:4896|Schizosaccharomyces pombe | 1407 NCBITaxon:83333|Escherichia coli K-12 | 5067