2024-05-12 snapshot stats & major changes

pgaudet commented 2 months ago

https://docs.google.com/spreadsheets/d/1Ao8zOw4WNeX97fBABY6pTP8CMBhp7EG7gwT2cCKJc0c/edit#gid=0

pgaudet commented 2 months ago

Major changes:

Annotated bioentities

protein_complex 1395 / 2415 57.76%
ncRNA -159 / 302 -52.65%

By Qualifier

contributes_to | 771 / 34165 | 2.26% (SGD bug fixed)

By Evidence

NAS 4911 / 28985 16.94%

By model organism - NCBITaxon:9606|Homo sapiens 14100 : IPI +996 | NAS + 4904 | TAS +6038

- New NAS are ComplexPortal (4900 rather than 10)
- TAS: in AmiGO versus staging I only see 200 annotations differences. I also reported mismatched between the stats and what I seem in AmiGO verus staging in the last release: https://github.com/geneontology/go-releases/issues/86
- IPI: I only see 189 annotations differences.

- NCBITaxon:10116|Rattus norvegicus -1561: mostly IEAs // AmiGO versus staging: -1618 - NCBITaxon:10090|Mus musculus 375: EXP - NCBITaxon:7955|Danio rerio -509: IEA - NCBITaxon:559292|Saccharomyces cerevisiae S288C 990: 739 IDA, 180 IMP, +761 contributes_to - NCBITaxon:7227|Drosophila melanogaster -1191: IEAs

By group

ComplexPortal 6367 / 26888 23.68% >> mostly human

pgaudet commented 2 months ago

No major changes other than many new ComplexPortal annotations for human.

pgaudet commented 2 months ago

Hi @kltm

We can go ahead and complete the release with this snapshot.

Thanks, Pascale

geneontology / go-releases

2024-05-12 snapshot stats & major changes #87