geneontology / go-shapes

Schema for Gene Ontology Causal Activity Models defined using RDF Shapes
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Relax constraints on has-input to allow SO sequence features #258

Open lpalbou opened 3 years ago

lpalbou commented 3 years ago

Following shex errors mentioned in https://github.com/geneontology/geneontology.github.io/issues/269#issuecomment-786302268 and the discussion on shex error reporting: https://github.com/geneontology/go-shapes/issues/257

A model was spotted invalid by shex because of an activity has input SO term. SO term don't seem to be handled in shex right now, if we wanted to authorize such pattern, it would have to be added here: https://github.com/geneontology/go-shapes/blob/e05a415d8b5178c4ac2b4662d42171d14f19a1cf/shapes/go-cam-shapes.shex#L371