geneontology / go-site

A collection of metadata, tools, and files associated with the Gene Ontology public web presence.
http://geneontology.org
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Create new rule to prevent propagation of certain terms by orthology/similarity #2106

Open pgaudet opened 6 years ago

pgaudet commented 6 years ago

From @pgaudet on November 23, 2017 12:23

Hello,

Following up on #13004, we need to implement a rule to prevent propagation of GO:0001618 virus receptor activity annotations.

It may make sense to also include other terms - to be discussed with the Virus team at Swiss-Prot.

Copied from original issue: geneontology/go-ontology#14641

pgaudet commented 6 years ago

Only allow EXP (ECO:0000006) and subclasses in ECO (to confirm with Virus Swiss-Prot group)

cmungall commented 6 years ago

OK, as discussed on the call, @dougli1sqrd will start with a check that highlights any association to GO:0001618 that has evidence other than subClassOf* of ECO:0000006

ValWood commented 6 years ago

Other terms which maybe should not be propagated "response to....." (at least high level ones) from https://github.com/geneontology/go-annotation/issues/1344