geneontology / go-site

A collection of metadata, tools, and files associated with the Gene Ontology public web presence.
http://geneontology.org
BSD 3-Clause "New" or "Revised" License
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PANTHER as a service sometimes gives different results in different formats for same URL #50

Closed kltm closed 9 years ago

kltm commented 9 years ago

url = "http://pantherdb.org/webservices/go/overrep.jsp?ontology=biological_process&input=P31946%0AP62258%0AQ04917%0AP61981%0AP31947%0Abaxter%0AP27348%0AP63104%0AQ96QU6%0AQ8NCW5&species=HUMAN&correction=bonferroni&format=html"

About 5%-10% of the time, a couple of people (and several bots) have gotten different results when serially contacting the same URL. In these results there has been:

This has been an issue dealt with on email, but hopefully we can catch-up with the description here.

kltm commented 9 years ago

@mugitty pinging on Anushya.

kltm commented 9 years ago

@mugitty I was wondering if there was any update on this. A few days ago I tried and did not get error results after twenty tries, but today the amigo unit test dealing with PANTHER is failing (two of three tries) and using https://github.com/geneontology/go-site/blob/master/tests/panther-hammer.py gave almost immediate error results.

mugitty commented 9 years ago

Resloved