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geneontology / minerva

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Inferred type decoration #4

Closed kltm closed 2 years ago

kltm commented 9 years ago

This is to bookmark a possible feature discussed with @hdietze. Essentially, inferred types could have an additional property that give a hint about the rational/genesis of an inferred type. This would not prevent "dupe scanning", but it would give more context for downstream consumers to figure out what to do with the information.

kltm commented 9 years ago

At some point, maybe on the wiki, it would be good to document some of our expectations for what is returned. Maybe we could sit down at some point and have a doc afternoon.

cmungall commented 9 years ago

Another way to think about this is a generalised predictions framework. Owl reasoners give predictions with p=1 but we may want to leverage other kinds of predictions in the future

On Thursday, June 18, 2015, kltm notifications@github.com wrote:

At some point, maybe on the wiki, it would be good to document some of our expectations for what is returned. Maybe we could sit down at some point and have a doc afternoon.

— Reply to this email directly or view it on GitHub https://github.com/geneontology/minerva/issues/4#issuecomment-113337565.

kltm commented 9 years ago

Cool, yes--I'd like to keep all this supple enough that we don't have to revisit many assumptions if we want to add something like that later.

vanaukenk commented 2 years ago

See #437 Curators would like unique evidence on inferred annotations and some indication of how the inference was made.