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geneontology / minerva

BSD 3-Clause "New" or "Revised" License
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Add feature or workflow to produce both inferred and non-inferred GPADs #539

Open kltm opened 9 months ago

kltm commented 9 months ago

Currently, the minerva processes in place only produce GPAD files with inferred annotations included. From a discussion related to SGD imports (https://github.com/geneontology/project-management/issues/34), it would be good to be able to compare what annotation is being added to GPAD output from minerva.

Closing this ticket would be a documented CLI method (or series of CLI commands) of providing a set of TTL files (directory) and producing an inferred GPAD output file and an uninferred GPAD output file.

Tagging @balhoff @vanaukenk @suzialeksander @dustine32 .

kltm commented 9 months ago

From meeting this morning, bumping implementation back to discussion.