Isoform display in label (originally on the visual tool)

[pmasson55]

Hi @thomaspd (isoform discussion) The two different specific isoforms of a protein (ex:P00973-1 and P00973-2) used in a model are not displayed in the graphical view, only the gene name is displayed. Ex: OAS1 in the model http://noctua.geneontology.org/editor/graph/gomodel:6246724f00001042 Would it be possible to display the precise isoform in the graphical view? Proposal: for example when OAS1 with accession P00973-1 is used for the activity or input->"OAS1 isoform 1" can be display (or a shorter version if better,easier) and P00973-2 would be OAS1 isoform 2, etc... Thx.

[thomaspd]

@kltm I assume the "display name" shown in Noctua, like "OAS1 Hsap" is generated as part of the NEO pipeline. Is that right? Or should this ticket be elsewhere?

[kltm]

I would recommend moving this back to the NEO tracker as part of a larger discussion about identifiers and labels. We generally want a single source of truth for identifiers and labels, rather than having each client worry about that on its own. Currently, the SoT for things like thise would be NEO.

Tagging @cmungall

[pgaudet]

You can see an example of this in model 6246724f00001042

looks like this in the VPE form

(gene product not shown)

But in the Graph Editor the isoform 'enabler' is correctly shown:

[pgaudet]

Strangely, when I used an isoform as an enabler in the VPE, it seemed to work, see 627d95ee00001341

Looks like this: