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geneontology / neo

noctua entity ontology
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IRF3 Hsap is showing up multiple times #22

Closed cmungall closed 6 years ago

cmungall commented 6 years ago

Caused by #20

neo-goa_human.obo : 

[Term]
id: UniProtKB:O15360
name: FANCA Hsap
synonym: "FANCA" BROAD []
synonym: "FANCA_HUMAN" RELATED []
synonym: "FANCA" RELATED []
synonym: "FAA" RELATED []
synonym: "FACA" RELATED []
synonym: "FANCH" RELATED []
synonym: "HGNC:3582" RELATED []
xref: HGNC:HGNC:3582
is_a: PR:000000001 ! protein
relationship: in_taxon NCBITaxon:9606

addition of target/neo-goa_human_isoform.obo brings in unwanted IDs

Term]
id: UniProtKB:F5H8D5
name: FANCA Hsap
synonym: "FANCA" BROAD []
synonym: "F5H8D5_HUMAN" RELATED []
synonym: "FANCA" RELATED []
synonym: "HGNC:3582" RELATED []
xref: HGNC:HGNC:3582
is_a: PR:000000001 ! protein
relationship: in_taxon NCBITaxon:9606
relationship: has_gene_template UniProtKB:O15360

[Term]
id: UniProtKB:H3BM41
name: FANCA Hsap
synonym: "FANCA" BROAD []
synonym: "H3BM41_HUMAN" RELATED []
synonym: "FANCA" RELATED []
synonym: "HGNC:3582" RELATED []
xref: HGNC:HGNC:3582
is_a: PR:000000001 ! protein
relationship: in_taxon NCBITaxon:9606
relationship: has_gene_template UniProtKB:O15360

[Term]
id: UniProtKB:H3BNS0
name: FANCA Hsap
synonym: "FANCA" BROAD []
synonym: "H3BNS0_HUMAN" RELATED []
synonym: "FANCA" RELATED []
synonym: "HGNC:3582" RELATED []
xref: HGNC:HGNC:3582
is_a: PR:000000001 ! protein
relationship: in_taxon NCBITaxon:9606
relationship: has_gene_template UniProtKB:O15360

...
...
...

[Term]
id: UniProtKB:O15360-2
name: FANCA Hsap
synonym: "FANCA" BROAD []
synonym: "FANCA_HUMAN" RELATED []
synonym: "FANCA" RELATED []
synonym: "FAA" RELATED []
synonym: "FACA" RELATED []
synonym: "FANCH" RELATED []
is_a: PR:000000001 ! protein
relationship: in_taxon NCBITaxon:9606
relationship: has_gene_template UniProtKB:O15360

we don't want the additional trembl entries, only the dash-isoforms