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autocomplete not filling in selection for some with fields #231

Open krchristie opened 11 months ago

krchristie commented 11 months ago

I was trying to edit a model in the form:

http://noctua.geneontology.org/workbench/noctua-form/?model_id=gomodel%3A64b9cb1500000296

to fill in the with field for all of my IMP annotations. Mostly this worked fine.

However, there was one with field that refused to accept a value, either when I pasted the data in, or when I selected it from the available options in the menu. I was forced to go to the graph editor to add this with value.

Notice the row highlighted in blue that does NOT have a yellow box indicating a change that needs to be saved.

20230725-formBug-cannotAutofill-SingleWithField

pgaudet commented 11 months ago

I am not sure the form checks this (and whether this is related to the issue here), but it seems weird to have an IMP for the root MF. Does it accept ND?

krchristie commented 11 months ago

I am not sure the form checks this (and whether this is related to the issue here), but it seems weird to have an IMP for the root MF. Does it accept ND?

These aren't root annotations indicating "unknown". These are Process only annotations where the root annotation is something Paul insisted on to indicate that some function is involved in this process. I always use the same evidence code for all the lines in a Process only annotation since this is one statement based on the mutant phenotype. ND would not be appropriate as this annotation is not being made on the basis of "no data", but on the mutant phenotype of the affected process indicating that the gene product must have some function.

I also don't think this is relevant since ALL of the annotations I was trying to change were IMP annotations and the one blank that couldn't be completed wasn't the evidence line on the anonymous root MF.

Here's the graph view of what these annotations are:

20230728-Tmem232-paper