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geneontology / noctua-models

This is the data repository for the models created and edited with the Noctua tool stack for GO.
http://noctua.geneontology.org/
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Help, annotation switches to a different process than specified-> (ref: gomodel:60e7989d00000085) #197

Open ValWood opened 3 years ago

ValWood commented 3 years ago

http://noctua.berkeleybop.org/editor/graph/gomodel:60e7989d00000085)

I am trying to create a model with the following 3 annotons:

Npr3 (GATOR1-SEACIT GTPase complex subunit Npr3) enables GTPase activator activity part_of negative regulation of TORC1 signaling occurs_during cellular response to nitrogen starvation

Gtr1 (RagA GTPase Gtr1) enables protein serine/threonine kinase activator activity part_of positive regulation of TORC1 signaling

Tor2 (TORC1 serine/threonine protein kinase) protein serine/threonine kinase activity part_of TORC1 signaling (GO:0038202) occurs_in fungal-type vacuole membrane (GO:0000329)

I will then connect them up as: Npr3 has_input (relation: directly negatively regulates) Gtr1 Gtr1 has_input (relation: directly positively regulates) Tor2

However, if I add the Npr3 annotation, and then try to create the Gtr1 annotation, the BP for Gtr1 gets switched to negative regulation of TORC1 signaling. If I then do it the other way around the Npr3 annotation gets switched to positive regulation. (even though I explicitly stated the opposite in the annoton).

What am I doing wrong? Could this be trouble-shooted on the Next Noctua office hours call? (or some other time).

Thanks

ValWood commented 3 years ago

I just tried again and it switched again. This is really odd as I haven't even yet made any connection between gtr1 and npr2.