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Search annotation is not functionning properly...Loss of evidence codes #75

Closed pmasson55 closed 5 months ago

pmasson55 commented 5 months ago

Hi,

It seems that all evidence codes have disappeared from the search annotation tool (at least for some people). References are still present as well as the assigned by field. But for the evidences, it' all gone... Hope it's easily fixed. Thx in advance, Patrick.

vanaukenk commented 5 months ago

@pmasson55 Thank you for reporting this.

I can confirm that the evidence codes are missing from the search annotation functionality on both the Noctua VPE and the Noctua form.

I also just checked the Function Companion on the graph editor and although the evidence codes are displayed in the AmiGO-like interface that comes up, when I try to filter by Evidence Code on the left-hand list of facets, it says 'Nothing to filter'. The same behavior is found on the main GO AmiGO site.

This suggests to me that there might be an issue with evidence codes in the underlying annotation index, but I'll need @kltm to investigate further.

@tmushayahama is out this week, but I'm not sure this is a strictly Noctua bug.

We'll try to get this sorted ASAP.

kltm commented 5 months ago

Working on it at https://github.com/geneontology/amigo/issues/716

pgaudet commented 5 months ago

This is not a Noctua problem. It will get resolved when https://github.com/geneontology/amigo/issues/716 is fixed.

Thanks for reporting this.