geneontology / obographs

Basic and Advanced OBO Graphs: specification and reference implementation

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obographs 2 OWL conversion #23

Open dosumis opened 7 years ago

dosumis commented 7 years ago

Conversion from obo-graph to OWL would be very useful e.g. for a pure Python implementation of DOS-DPs (limited to suitable simple design patterns), or a simple, OWL-API independent OWL writer for the VFB KB. Any prospects for this?

dosumis commented 7 years ago

5

cmungall commented 7 years ago

Just a matter of finding the time. I'm tempted to converted the reference converter to scala, so much pattern matching, horrible in java, cc @balhoff

We may end up with some export ability in python: https://github.com/biolink/biolink-api/tree/master/obographs

but the canonical converter should be a JVM language

dosumis commented 7 years ago

I'm tempted to converted the reference converter to scala

Make sense. Will probably use SCOWL for new VFB NEO KB to OWL script.

matentzn commented 1 year ago

We need to bump this ticket here..

cc @cmungall @julesjacobsen