Open cmungall opened 7 years ago
Many consumers such as @dvklopfenstein would like to see how GO looks in this representation.
This permanent URL should be active on monday: http://purl.obolibrary.org/obo/go/extensions/go-plus.json
The URL is intended to be permanent, but the underlying representation may change.
For an explanation of go-plus see http://geneontology.org/page/download-ontology
Another python parser and serializer for the list https://github.com/tgbugs/pyontutils/blob/master/pyontutils/obo_io.py.
Many developers have written redundant obo parsers in various languages. Due to the details of the spec it is difficult to write a robust parser. OWL is very difficult to work with, many people use the wrong level of abstraction, e.g. XML parsing. obographs is designed with these developers in mind, see https://douroucouli.wordpress.com/2016/10/04/a-developer-friendly-json-exchange-format-for-ontologies/
This meta-ticket is for gathering feedback from knowledgeable bioinformatics coders who have struggled with obo or owl issues
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