geneontology / pathways2GO

Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)
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Change R-HSA-2395876 mapping from GO:0017110 to GO:0044716 #129

Closed ukemi closed 3 years ago

ukemi commented 3 years ago

R-HSA-2395876 is: NUDT15 hydrolyses 8-oxo-dGDP to 8-oxo-dGMP

GO:0017110 is: Catalysis of the reaction: a nucleoside diphosphate + H2O = a nucleoside monophosphate + phosphate.

For this reaction, we can be more specific since it is only a single substrate: GO:0044716: Catalysis of the reaction 8-oxo-GDP + H2O = 8-oxo-GMP + phosphate.

deustp01 commented 3 years ago

Don't we want GO:0044715; Catalysis of the reaction 8-oxo-dGDP + H2O = 8-oxo-dGMP + phosphate (complement to #128, wher there was previously a deoxy GO term attached to a ribo reaction). If so, it's done, visible on dev site, for release in June.