geneontology / pathways2GO

Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)
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Create Reactome reactions for the dehydrogenase activity of XDH #131

Closed deustp01 closed 3 years ago

deustp01 commented 3 years ago

Existing Reactome reactions 74247 and 74258 capture the two-step conversion of hypoxanthine to urate with generation of H2O2. An alternative form of the same enzyme catalyzes the same two steps but with the reduction of NAD+ to NADH + H+, and this is said to be major route under normal physiological conditions (e.g., Ichida et al. 1212 - PMID: 23203137). So create the two reactions that use NAD+.

deustp01 commented 3 years ago

Done - see reactions here and here on development web site. @ukemi