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geneontology / signor2gocam

Converting Signor pathways to GO-CAM
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Only one instance of each gene product per pathway #5

Closed dustine32 closed 4 years ago

dustine32 commented 6 years ago

For SIGNOR, there should only be one instance of each gene product for now, just as you proposed (so only one node for ATR, even though it has enabled_by relations to many MF instances, e.g. one with has input BRCA1, one with has input ATM, one with has input CHEK2, etc.)

dustine32 commented 6 years ago

Before I was checking for the full [MF enabled by GP] statement existing, generating all statement elements if not, regardless of whether any of the elements already exist. I now reuse at least the GP individual if it already exists in the model.

I should write some SPARQL to check this.

dustine32 commented 4 years ago

Now being handled in #15