Difficult to read metabolic models when all small molecules are displayed

geneontology / wc-gocam-viz

Web component to visualize GO-CAMs

BSD 3-Clause "New" or "Revised" License

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Difficult to read metabolic models when all small molecules are displayed #43

Open ValWood opened 3 months ago

ValWood commented 3 months ago

The metabolic pathways are very hard to consume when they display all of the small molecules. It would be better if there was a toggle to "collapse small molecules" so that you could see only the entities.

e.g http://noctua.geneontology.org/workbench/noctua-alliance-pathway-preview/?model_id=gomodel%3AYeastPathways_TCA-EUK-PWY

http://noctua.geneontology.org/workbench/noctua-alliance-pathway-preview/?model_id=gomodel%3A633b013300000306

vanaukenk commented 3 months ago

Also, we should filter out duplicates in the list on the right side of the model.