genepi mtdna-server-2 issues

genepi / mtdna-server-2

mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes

MIT License

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issues

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ERROR ~ Unable to parse config file: '/media/manish/Data/Jyoti_Mridha_AIC/Program/mtdna-server-2-2.1.14/nextflow.config'

#26 Jyoti-Mridha opened 1 month ago
2
Feature request: publishDir, annotation , etc...

#25 lindenb opened 4 months ago
1
No valid mtDNA contigs

#24 SaelinB closed 4 months ago
1
Is it possible to detect mutations in Mouse chrM

#23 HuangRuocheng closed 5 months ago
3
-profile test : "Loading configuration from file 'haplogrep3.yaml' failed" for 'MTDNA_SERVER_2:HAPLOGROUPS_CONTAMINATION'

#22 lindenb closed 5 months ago
14
Features/create mtdna reference

#21 seppinho closed 5 months ago
0
no-home option error

#20 fmurgia closed 4 months ago
3
nextflow documentation

#19 gianfilippo closed 6 months ago
6
Use histograms in quality control reports

#18 lukfor closed 8 months ago
0
Add subsampling module

#17 seppinho closed 8 months ago
0
Update packages

#16 seppinho closed 8 months ago
0
Add Coverage correction for diagnostic NGS

#15 seppinho closed 8 months ago
0
Create a report per sample with details

#14 lukfor closed 8 months ago
0
Features/uniform calling

#13 seppinho closed 8 months ago
0
Add unique ID check

#12 seppinho closed 8 months ago
0
Update run-tests.yml

#11 seppinho closed 8 months ago
0
Update github-action to use latest nf-test and Nextflow versions

#10 lukfor closed 8 months ago
0
Features/combined calling mode

#9 seppinho closed 8 months ago
0
Fix/mutect2 report

#8 seppinho closed 10 months ago
0
Add interactive dashboard

#7 lukfor closed 10 months ago
0
Variant Calling Parameter not updated

#6 haansi closed 8 months ago
0
detection limit as input field / adapt dropdown box

#5 haansi closed 8 months ago
0
Set label for `samtools index` in `cloudgene.yaml`

#4 lukfor closed 10 months ago
0
Add missing `publishDir` to annotate

#3 lukfor closed 10 months ago
0
Update error messages

#2 lukfor closed 10 months ago
0
Migrate to DSL2

#1 seppinho closed 11 months ago
0