genetics-of-dna-methylation-consortium godmc_phase2 issues

genetics-of-dna-methylation-consortium / godmc_phase2

This repository contains the code to run the analysis pipeline for phase 2 of goDMC released June 2024.

GNU General Public License v3.0

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remove reference to unused variable quality_type

#26 ejh243 closed 1 month ago
0
[Code Refactor]: Any other option for `quality_type` in the config file if we use Sanger imputation server?

#25 SiyiSEA closed 1 month ago
2
[Bug]: path to mQTL mapping

#24 epzjlm closed 1 month ago
3
[Bug]: chrX methylation processing

#23 epzjlm closed 1 month ago
1
[Bug]: chrX coding

#22 epzjlm closed 1 month ago
0
check the outputs for cellcount and age prediction

#21 SiyiSEA closed 1 month ago
6
[Code Refactor]: Enhance the ./check_upload.sh script for checking the cor_plot.pdf

#20 SiyiSEA closed 1 month ago
0
[Bug]: 03d-

#18 ks164 closed 1 month ago
6
[Bug]: cannot run aggregate_adjustment1.sh

#17 ks164 closed 3 months ago
9
unmute the error message for the PACEprojector

#16 SiyiSEA closed 3 months ago
0
fix the dollar operator for 03a

#15 SiyiSEA closed 3 months ago
0
[Bug]: 3a halts at calculate DunedinPACE

#14 ks164 closed 3 months ago
9
[Bug]: 03g issue with cg07959070

#13 drsora closed 4 weeks ago
10
[Bug]: impute package moved from CRAN to biocManager

#12 epzjlm closed 2 months ago
1
[Bug]: in 3e, ./03e-methylation_adjustment2.sh 1 fails due to indexing issue

#10 drsora closed 3 months ago
2
[Bug]:

#9 xuz1 closed 3 months ago
1
install error message: EpiDISH requires R.4.1 or greater

#6 ks164 closed 4 months ago
1
Update links in config.yml

#5 SiyiSEA closed 4 months ago
0
Update 01-check_data.sh

#4 epzjlm closed 4 months ago
0
Update README.md

#3 epzjlm closed 4 months ago
0
Update README.md

#2 epzjlm closed 4 months ago
0
Update README.md

#1 epzjlm closed 4 months ago
0