possible bug using the -mk flag?

genetics-statistics / GEMMA

Genome-wide Efficient Mixed Model Association

https://github.com/genetics-statistics/GEMMA

GNU General Public License v3.0

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possible bug using the -mk flag? #212

Closed yluo86 closed 4 years ago

yluo86 commented 4 years ago

I'm trying to specify two relatedness matrix in my association study by using the -mk flag as suggested in the manual. But it gives out the following error:

error! missing relatedness file.

my GRM file looks like this /dir/to/grm1.txt /dir/to/grm2.txt

When using -k flag for each singe one of the GRM, gemma runs nicely. Any suggestions?

pjotrp commented 4 years ago

Check the code to see what is supposed to happen.