Longitudinal Phenotype data

genetics-statistics / GEMMA

Genome-wide Efficient Mixed Model Association

https://github.com/genetics-statistics/GEMMA

GNU General Public License v3.0

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Longitudinal Phenotype data #256

Open ryshi06 opened 2 years ago

ryshi06 commented 2 years ago

Hi,

I am new to mixed-effect models. I have a longitudinal phenotype data and every subject has different numbers of longitudinal measurements. All the covariates are not time-dependent. I am wondering can GEMMA deal with this situation? If so, is the univariate linear mixed model the one I need?

Thanks. Ruyu

SNgalaxy commented 2 years ago

I am running eQTL analysis and I have multiple samples from different biopsy locations in my expression data that I can not remove for my analysis. How GEMMA handle the phenotypic records in this situation?

pjotrp commented 2 years ago

Cross-posting is not allowed.