BIMBAM format (preferred)

genetics-statistics / GEMMA

Genome-wide Efficient Mixed Model Association

https://github.com/genetics-statistics/GEMMA

GNU General Public License v3.0

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BIMBAM format (preferred) #281

Open Sh1ne111 opened 3 months ago

Sh1ne111 commented 3 months ago

Hi, Recently, while using GEMMA for GWAS, I noticed that the tutorial recommends the BIMBAM format as the preferred genotype file format. I'm curious about why BIMBAM is preferred and what advantages it offers over genotype coding (0, 1, 2).

Sincerely,

Chen S