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genome-nexus / annotation-tools

Tools developed for AACR GENIE to allow annotation of vcf and maf files from a number of centers and merging the results
MIT License
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Blank FAILURE_REASONs #64

Open Chelsea-Na opened 5 months ago

Chelsea-Na commented 5 months ago

We are experiencing some annotations that have an annotation_status = FAILED and failure_reason = blank. Is it possible to run this on your end and see what the issue is? Examples are in the attached file. I checked that the reference allele matches the reference genome and the formatting seems correct at first glance.

Note: The original data comes from a tumor-normal VCF.

Thank you!

failed-annotation.csv