genome-nexus / genome-nexus-annotation-pipeline

Library and tool for annotating MAF files using Genome Nexus Webserver API
MIT License
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Add Ref_Tri and Var_Tri columns #162

Closed inodb closed 3 years ago

inodb commented 3 years ago

Fix https://github.com/genome-nexus/genome-nexus-annotation-pipeline/issues/146. Add Ref_Tri and Var_Tri columns using data from nucleotide_context field. This will be useful for algorithms computing tri nucleotide change frequencies such as mutational signatures and hotspot detection