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genome-nexus / genome-nexus-annotation-pipeline

Library and tool for annotating MAF files using Genome Nexus Webserver API
MIT License
8 stars 27 forks source link

Upgrade Spring Boot, Spring Batch, and cBioPortal #177

Closed ao508 closed 3 years ago

ao508 commented 3 years ago

cBioPortal version: c6567af85d673ded1935805258dca4a5195c52a7 Spring Batch: 2.3.3.RELEASE Spring Boot: 5.2.6.RELEASE

Replaces PR https://github.com/genome-nexus/genome-nexus-annotation-pipeline/pull/169

Signed-off-by: Angelica Ochoa 15623749+ao508@users.noreply.github.com

ao508 commented 3 years ago

@inodb circleci is still failing but passing locally. Would you mind assisting with this?