Open zimnyx opened 3 years ago
This issue happens only when Dockerfile is used. Please see https://github.com/genome-nexus/genome-nexus/issues/438#issuecomment-824283217 for detailed description of the issue.
It's not only REF_ENSEMBL_VERSION that is ignored. All env vars defined here https://github.com/genome-nexus/genome-nexus/blob/master/docker-compose.yml#L18 are not visible to scripts/import_mongo.sh
This issue happens only when Dockerfile is used. Please see https://github.com/genome-nexus/genome-nexus/issues/438#issuecomment-824283217 for detailed description of the issue.
It's not only REF_ENSEMBL_VERSION that is ignored. All env vars defined here https://github.com/genome-nexus/genome-nexus/blob/master/docker-compose.yml#L18 are not visible to scripts/import_mongo.sh