genome-nexus / genome-nexus-importer

Import data into MongoDB for use by https://github.com/genome-nexus/genome-nexus/
MIT License
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clean up clinvar data with -1 location #47

Closed leexgh closed 3 years ago

leexgh commented 3 years ago

Part of https://github.com/cBioPortal/cbioportal/issues/8470 remove "wrong clinvar data" from database, e.g. position is -1 (-1 will be duplicated indexs, remove them in order to build the index for clinvar queries)