Profile VEP Command Line Tool Performance on AWS

genome-nexus / genome-nexus-vep

Java spring boot wrapper around VEP

https://www.genomenexus.org

MIT License

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Profile VEP Command Line Tool Performance on AWS #3

Closed averyniceday closed 4 years ago

averyniceday commented 4 years ago

Using K8S config -- launch VEP wrapper with latest version of VEP command line tool. Access node and manually run VEP command line tool using up to date args (fasta files, fork enabled, etc.) Profile for 350,000 records (mskimpact) as a baseline.