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genome-rcast / karkinos

Tumor genotyper, that detects SNV, absolute CNV and Tumor contents
Apache License 2.0
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Fix threshold of srm filter #24

Closed federkasten closed 3 years ago

federkasten commented 3 years ago

This PR modifies the threshold of the srm filter to reduce false-negatives by tightening it.

codecov-io commented 3 years ago

Codecov Report

Merging #24 (04a4552) into master (f5495bb) will not change coverage. The diff coverage is 0.00%.

Impacted file tree graph

@@            Coverage Diff            @@
##             master      #24   +/-   ##
=========================================
  Coverage     11.28%   11.28%           
  Complexity      433      433           
=========================================
  Files           132      132           
  Lines         12596    12596           
  Branches       2219     2219           
=========================================
  Hits           1421     1421           
  Misses        11107    11107           
  Partials         68       68
Impacted Files Coverage Δ Complexity Δ
...tokyo/rcast/karkinos/filter/SupportReadsCheck.java 0.00% <0.00%> (ø) 0.00 <0.00> (ø)

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