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genome / analysis-workflows

Open workflow definitions for genomic analysis from MGI at WUSM.
MIT License
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v4.1.8.1 weird behaviour, not seen in v4.2+ #1056

Closed IrenaeusChan closed 2 years ago

IrenaeusChan commented 3 years ago

For broadinstitute/gatk:4.1.8.1 mutect calls variants that do not appear in IGV or pileup. Behaviour not seen in broadinstitute/gatk:4.2+