genome / bam-readcount

Count bases in BAM/CRAM files
MIT License
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make test fails RunBamReadcount (python vs python2) #60

Open darked89 opened 5 years ago

darked89 commented 5 years ago

The syntax of the python files follows python2, but the program assumes that:

!/usr/bin/env python

defaults to python2. Which is not the case i.e on Linux Manjaro 18. Fixed by:

!/usr/bin/env python2

in bam-readcount/integration-test/bam-readcount_test.py bam-readcount/build-common/python/*py