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genome / breakdancer

SV detection from paired end reads mapping
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breakdancer to vcf #6

Closed boboppie closed 9 years ago

boboppie commented 9 years ago

Dear devs,

Is there a script to convert native breakdancer output to vcf format?

Best wishes, Fengyuan

boboppie commented 9 years ago

Hi, I've found a script in metasv package: https://github.com/bioinform/metasv/blob/master/metasv/gen_vcf.py