I am trying to prepare my genome for submission to NCBI.
tried this command
python gag.py --fasta /Users/emmannaemeka/Desktop/Gpm/maker/data/mucuna/mucuna_pruriens_raw.fa --gff /Users/emmannaemeka/muc1_genome_snap2.all.gff
where :/Users/emmannaemeka/Desktop/Gpm/maker/data/mucuna/mucuna_pruriens_raw.fa is my original genome assembly fasta
and /Users/emmannaemeka/muc1_genome_snap2.all.gff the maker off
GAG ran and kept saying "no parent"
the fasta am supposed to use is it the maker generated protein or transcript fasta?
Hello,
I am trying to prepare my genome for submission to NCBI.
tried this command
python gag.py --fasta /Users/emmannaemeka/Desktop/Gpm/maker/data/mucuna/mucuna_pruriens_raw.fa --gff /Users/emmannaemeka/muc1_genome_snap2.all.gff where :/Users/emmannaemeka/Desktop/Gpm/maker/data/mucuna/mucuna_pruriens_raw.fa is my original genome assembly fasta
and /Users/emmannaemeka/muc1_genome_snap2.all.gff the maker off
GAG ran and kept saying "no parent"
the fasta am supposed to use is it the maker generated protein or transcript fasta?
How can i solve this?
Thanks