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genomeannotation / transvestigator

Validates transcriptome and prepares it for submission to the NCBI
MIT License
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Store RSEM information in/with Transcript object #11

Closed bruab closed 10 years ago

bruab commented 10 years ago

Right now a Transcript has [genes] and a Sequence object. Maybe it gets an RSEMStats object or tuple that holds the IsoPct, TPM and FPKM?

The goal here is to eventually have code that reads

if transcript.get_fpkm_score() < SOME_NUMBER:
    do_stuff()