Attempt to fix phase for partial features starting at base 2 or 3

genomeannotation / transvestigator

Validates transcriptome and prepares it for submission to the NCBI

MIT License

3 stars 1 forks source link

Attempt to fix phase for partial features starting at base 2 or 3 #5

Closed bruab closed 10 years ago

bruab commented 10 years ago

In order to (maybe) eliminate a bunch of NCBI warnings, if gene/mrna/cds start at 2, change start to 1 and add "codon_start 2"; if they start at 3, change it to 1 and add "codon_start 3"